Zeiss LSM 510 META Bedienungsanleitung

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Carl Zeiss - Training Application and Support Center
Zeiss LSM 510 META - Guided Tour
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Confocal microscopy
Zeiss LSM 510 and Zeiss LSM 510 META
Visualisation of biological structures in 3D
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Inhaltsverzeichnis

Seite 1 - Confocal microscopy

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour1Confocal microscopyZeiss LSM 510 and Zeiss LSM 510 METAVisualisa

Seite 2 - Confocal Principle

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour101) Double click theLSM 510 icon2) Select “Scan NewImages”3) Sel

Seite 3 - Axioplan 2 imaging

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour111) In the main menu File select New databaseCreating a database

Seite 4 - Axiovert 100M

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour121) Select AcquireTurning on the lasers2) Select Laser3) Switch

Seite 5 - LSM 510 META

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour13For laser scanning imageacquisition:Set slider to “LSM”(pull sl

Seite 6 - Axiovert 200M

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour14Toggle between Vis and LSM button in main menu, automatic swit

Seite 7

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour15• Starting the Zeiss LSM 510 microscope, software and laserSele

Seite 8

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour161) Select Micro (Main menu: Acquire)(For Axioskop 2 FS these se

Seite 9

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour17Focusing the microscope in fluorescence modeFluorescence is obs

Seite 10

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour18Focusing the microscope in transmitted modeUse no reflector cub

Seite 11

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour19• Starting the Zeiss LSM 510 microscope, software and laserSele

Seite 12 - Turning on the lasers

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour2Confocal PrincipleSignals from aboveand below the planeof focus

Seite 13

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour20Choosing the configurationMULTI TRACKUse for double ortriple la

Seite 14

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour211) Select Config in theAcquire menuSINGLE TRACK - lasers scan s

Seite 15 - Contents

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour225) Chose a configuration in theTrack Configuration menu.Select

Seite 16

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour23Multi Track Configuration2) Select Config1) Select Multi Track

Seite 17 - Fluorescence is observed by

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour24Cy5-Cy3-FITC Multi TrackThree laser lines and channels activate

Seite 18

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour251) Select ScanSetting the parameters for scanning2) Select Mode

Seite 19

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour26Setting the parameters for scanningNote: When using aAxioskop 2

Seite 20 - Choosing the configuration

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour27Adjust the scan speed - ahigher speed with averagingresults in

Seite 21

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour28Select the dynamic range - 8bit will give 256 gray levels,12 Bi

Seite 22

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour29Channel Settings - Adjusting the PinholeSet pinhole size to 1

Seite 23 - Multi Track Configuration

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour3Upright Zeiss LSM 510 confocal microscopeLSM 510 scan headAxiop

Seite 24 - Cy5-Cy3-FITC Multi Track

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour302) Select Fast XY for continuousfast scanning - useful forfindi

Seite 25

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour31Minimal Pixel Size determined by Nyquist SamplingAdjusting the

Seite 26

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour32Optical ZoomingThe level of zoom can bechanged either by using

Seite 27 - Adjusting the scan speed

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour33Selecting gain and offset – Choosing a lookup table1) Select Pa

Seite 28

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour34Detector gain determines thesensitivity of the detector bysetti

Seite 29

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour35Laser transmission should not be set higher than the saturation

Seite 30 - Image Acquisition

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour36Adjusting the Laser Intensity1) Set Pinhole to 1 Airy unit2) Se

Seite 31 - Pixel sizeMagnification

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour37Adjusting Gain and Offset1) Increase the Amplifier Offsetuntil

Seite 32 - Optical Zooming

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour38Adjusting the Laser, Gain and Offset using a Multi Track Config

Seite 33 - Blue = Zero (minimum)

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour39Setting up Gain and Offset - Multi Track1) Select Split XY in

Seite 34 - will need to be decreased

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour4Inverted Zeiss LSM 510 confocal microscopeLSM 510 scan headin ba

Seite 35 - Photobleaching is linear!

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour40Line Averaging2) Select Number for averaging. Themore the bette

Seite 36 - Adjusting the Laser Intensity

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour41Frame Averaging1) Select FrameFrame averaging helps reducephoto

Seite 37 - Adjusting Gain and Offset

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour42Collecting an Averaged Image1) Under Scan Average selectthe Num

Seite 38

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour43• Starting the Zeiss LSM 510 microscope, software and laserSele

Seite 39

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour44Scanning a Z-Series using Mark First/Last1) Select Z Stack2) St

Seite 40 - Line Averaging

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour45Using Auto Z Brightness CorrectionAuto Z provides an automatic

Seite 41 - Frame Averaging

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour46Confocal Z SectioningNumber of Sections for correct samplingOpt

Seite 42 - Collecting an Averaged Image

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour47Z Stack – Number of Slices and Increment1) Select Z slice - the

Seite 43

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour48Z - Series using Z Sectioning1) Select Z Stack2) Select Z Secti

Seite 44

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour491) Decide whether to Keep Interval(number of slices will change

Seite 45

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour5Upright Zeiss LSM 510 META confocal microscopeAxioplan 2 imaging

Seite 46 - Confocal Z Sectioning

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour50Viewing a Z - SeriesIn the image window1) Select xy2) Select S

Seite 47

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour51Viewing a Z - Series using Gallery1) Select Gallery2) Select Da

Seite 48 - Z - Series using Z Sectioning

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour52Viewing a Z- Series using Orthogonal Sections1) Select Ortho2)

Seite 49 - Z Sectioning – Setting Range

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour53Selecting and Saving a Region of Interest (ROI)1) SelectOverlay

Seite 50 - Viewing a Z - Series

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour54Using a ROI for faster image acquisition and data saving1) Sele

Seite 51 - Use Subset to

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour55Multiple Regions of Interest1) Un-select Fit Frame Size to boun

Seite 52

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour56Time Series• Set up scanning parametersfor image acquisition as

Seite 53

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour57Viewing a Time Series of a Z StackZ Sectionsfor any timeTime po

Seite 54

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour58Time Series – Physiology Experiments1) If required, usemultiple

Seite 55 - Multiple Regions of Interest

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour59Imaging a large area using Tile ScanThis function is onlyavaila

Seite 56 - Time Series

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour6Inverted Zeiss LSM 510 META confocal microscopeAxiovert 200MLSM

Seite 57

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour60Tiled ImageAny position can thenbe marked and asingle image acq

Seite 58

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour61• Starting the Zeiss LSM 510 microscope, software and laserSele

Seite 59

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour62Saving Data - Using Database1) Select Save or Save as on image

Seite 60 - Tiled Image

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour63Saving Data – Using Export1) Select File from LSM menu2) Select

Seite 61

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour64Shut Down Procedure 1. Go to: Acquire in the LSM menu - Laser

Seite 62 - Saving Data - Using Database

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour65Please note:This guided tour is intended merelyas a quick intro

Seite 63 - Saving Data – Using Export

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour66This guided tour is based onwork done byPeter JordanICRFLondonU

Seite 64 - Shut Down Procedure

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour7• Starting the Zeiss LSM 510 microscope, software and laserSelec

Seite 65 - Please consult the manual

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour8• Starting the Zeiss LSM 510 microscope, software and laserSelec

Seite 66

Carl Zeiss - Training Application and Support CenterZeiss LSM 510 META - Guided Tour91) First switch on the mercury lamp2) Turn on the remote control

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